The Connectome of the C. elegans hermaphrodite

Full Connectome Data

Individual Series Reconstructions

Chemical and electrical adjacency matrices for anterior neurons, N2U (.csv)
Chemical and electrical adjacency matrices (.csv)
Chemical and electrical adjacency matrices for anterior neurons, N2U (.xlsx)
Chemical and electrical annotated adjacency matrices (.xlsx)
Chemical and electrical adjacency matrices for posterior neurons, JSE (.csv)
 
Chemical and electrical adjacency matrices for posterior neurons, JSE (.xlsx)
 


Hermaphrodite Anterior Neuronal Connectivity Data (N2U)

Neurons are partially or fully reconstructed. Click on neuron name for maps and synapse lists.

ADAL

AIYL

ASGL

AVEL

AWCR

DB02

IL1VL

PVCL

RICR

RMDR

SABVL

SMDVL

VA05

VD02

ADAR

AIYR

ASGR

AVER

BAGL

DB03

IL1VR

PVCR

RID

RMDVL

SABVR

SMDVR

VA06

VD03

ADEL

AIZL

ASHL

AVFL

BAGR

DB04

IL2DL

PVDL

RIFL

RMDVR

SDQL

URADL

VA07

VD04

ADER

AIZR

ASHR

AVFR

BDUL

DB05

IL2DR

PVDR

RIFR

RMED

SDQR

URADR

VA08

VD05

ADFL

ALA

ASIL

AVG

BDUR

DD01

IL2L

PVM

RIGL

RMEL

SIADL

URAVL

VB01

VD06

ADFR

ALML

ASIR

AVHL

CANL

DD02

IL2R

PVNL

RIGR

RMER

SIADR

URAVR

VB02

VD07

ADLL

ALMR

ASJL

AVHR

CANR

DD03

IL2VL

PVNR

RIH

RMEV

SIAVL

URBL

VB03

VD08

ADLR

ALNL

ASJR

AVJL

CEPDL

DD04

IL2VR

PVPL

RIML

RMFL

SIAVR

URBR

VB04

AFDL

ALNR

ASKL

AVJR

CEPDR

DVA

OLLL

PVPR

RIMR

RMFR

SIBDL

URXL

VB05

AFDR

AQR

ASKR

AVKL

CEPVL

DVC

OLLR

PVQL

RIPL

RMGL

SIBDR

URXR

VB06

AIAL

AS01

AUAL

AVKR

CEPVR

FLPL

OLQDL

PVQR

RIPR

RMGR

SIBVL

URYDL

VB07

AIAR

AS02

AUAR

AVL

DA01

FLPR

OLQDR

PVR

RIR

RMHL

SIBVR

URYDR

VC01

AIBL

AS03

AVAL

AVM

DA02

HSNL

OLQVL

PVT

RIS

RMHR

SMBDL

URYVL

VC02

AIBR

AS04

AVAR

AWAL

DA03

HSNR

OLQVR

RIAL

RIVL

SAADL

SMBDR

URYVR

VC03

AIML

AS05

AVBL

AWAR

DA04

IL1DL

PDEL

RIAR

RIVR

SAADR

SMBVL

VA01

VC04

AIMR

AS06

AVBR

AWBL

DA05

IL1DR

PDER

RIBL

RMDDL

SAAVL

SMBVR

VA02

VC05

AINL

ASEL

AVDL

AWBR

DA06

IL1L

PLNL

RIBR

RMDDR

SAAVR

SMDDL

VA03

VC06

AINR

ASER

AVDR

AWCL

DB01

IL1R

PLNR

RICL

RMDL

SABD

SMDDR

VA04

VD01

Hermaphrodite Anterior Muscle and End Organ Connectivity Data (N2U)

Click here for abbreviation guide. Note: Some muscles may not have complete maps.

Neurons are partially or fully reconstructed. Click on neuron name for maps and synapse lists.

dBWML1

dBWML7

dBWMR3

GLRL

vBWML13

vBWML8

vBWMR17

dBWML10

dBWML8

dBWMR4

GLRR

vBWML14

vBWML9

vBWMR2

dBWML11

dBWML9

dBWMR5

GLRVL

vBWML15

vBWMR1

vBWMR3

dBWML12

dBWMR1

dBWMR6

GLRVR

vBWML16

vBWMR10

vBWMR4

dBWML13

dBWMR10

dBWMR7

hyp

vBWML17

vBWMR11

vBWMR5

dBWML14

dBWMR11

dBWMR8

pharyngealepithelium

vBWML2

vBWMR12

vBWMR6

dBWML2

dBWMR12

dBWMR9

vBWML1

vBWML4

vBWMR13

vBWMR7

dBWML3

dBWMR13

exc_gl

vBWML10

vBWML5

vBWMR14

vBWMR8

dBWML5

dBWMR14

GLRDL

vBWML11

vBWML6

vBWMR15

vBWMR9

dBWML6

dBWMR2

GLRDR

vBWML12

vBWML7

vBWMR16





Hermaphrodite Posterior Neuronal Connectivity Data (JSE)

Neurons are partially or fully reconstructed. Click on neuron name for maps and synapse lists.

AS10

AVFR

DA09

PDER

PQR

PVQR

VC06

AS11

AVG

DB07

PHAL

PVCL

PVR

VD11

AVAL

AVHL

DD06

PHAR

PVCR

PVT

VD12

AVAR

AVHR

DVA

PHBL

PVDL

PVWL

VD13

AVBL

AVJL

DVB

PHBR

PVDR

PVWR

AVBR

AVJR

DVC

PHCL

PVM

RID

AVDL

AVKL

LUAL

PHCR

PVNL

VA10

AVDR

AVKR

LUAR

PLML

PVNR

VA11

AVEL

AVL

PDA

PLMR

PVPL

VA12

AVER

DA07

PDB

PLNL

PVPR

VB10

AVFL

DA08

PDEL

PLNR

PVQL

VB11

Hermaphrodite Posterior Muscle and End Organ Connectivity Data (JSE)

Click here for abbreviation guide. Note: Some muscles may not have complete maps.

hyp

PhshR

Phso2R

vBWML21

vBWMR22

int8L

Phso1L

rect8

vBWML22

intL

Phso1R

vBWML19

vBWMR20

PhshL

Phso2L

vBWML20

vBWMR21



Hermaphrodite Pharyngeal Connectivity Data (N2T and N2W)

Neurons are partially or fully reconstructed. Click on neuron name for maps and synapse lists.

I1L

I3

M1

M3R

MCR

I1R

I4

M2L

M4

MI

I2L

I5

M2R

M5

NSML

I2R

I6

M3L

MCL

NSMR

Hermaphrodite Pharyngeal Muscle and End Organ Connectivity Data (N2T and N2W)

Click here for abbreviation guide. Note: Some muscles may not have complete maps.

bm

e2V

g1P

pm2D

pm4D

pm6D

e1D

e3D

g2L

pm2Vl

pm4Vl

pm6Vl

e1Vl

e3Vl

g2R

pm2VR

pm4VR

pm6VR

e1VR

e3VR

mc2V

pm3D

pm5D

pm7D

e2DL

g1AL

mc3V

pm3Vl

pm5Vl

pm7Vl

e2DR

g1AR

pm1

pm3VR

pm5VR

pm7VR


We thank John White and Jonathan Hodgkin for their help in transferring archival TEM data from The MRC/LMB to the Hall lab at Einstein for long term curation and study.

Contacts:

Scott W. Emmons, emmons@einstein.yu.edu, 718-430-3130

David H. Hall, hall@einstein.yu.edu, 718-430-2195

Christopher Brittin, cbrittin at einstein dot yu dot edu, 718-430-2249

Steven Cook, steven.j.cook at phd dot einstein dot yu dot edu, 718-430-2249

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